[Ubuntu] SGE 설치

패키지 설치

# apt install -y vim ssh git build-essential libhwloc-dev libssl-dev libtirpc-dev \
libmotif-dev libxext-dev libncurses-dev libdb5.3-dev libpam0g-dev pkgconf \
libsystemd-dev cmake gcc default-jdk qtchooser make gcc default-jdk qtchooser \
make gcc default-jdk qtchooser csh

# gcc --version
# make --version

 

사전 준비

# groupadd -g 490 sgeadmin
# useradd -u 495 -g 490 -r -m -d /home/sgeadmin -s /bin/bash -c "SGE Admin" sgeadmin


# visudo 
# Members of the admin group may gain root privileges
%admin ALL=(ALL) ALL
%sgeadmin ALL=(ALL) NOPASSWD:ALL //추가

ctrl + x 로 나가기

# vim /etc/hosts
192.168.207.30 master-ubuntu-sge
192.168.207.31 node01-ubuntu-sge
...

빌드

# wget https://github.com/daimh/sge/archive/refs/tags/8.1.9.tar.gz 
# tar zvxf 8.1.9.tar.gz
# export SGE_ROOT=/opt/sge
# export SGE_CELL=default
# mkdir -p $SGE_ROOT 
# cd /APP/enhpc/sge-8.1.9/source

!! 주석 처리
# vim 3rdparty/qtcsh/sh.proc.c
 51 //# define BSDWAIT
 
# sh scripts/bootstrap.sh -no-java -no-jni
# ./aimk -no-java -no-jni -no-secure
# echo Y | ./scripts/distinst -local -allall -libs -noexit 
# ln -s /usr/bin/qmake /opt/sge/bin/lx-amd64/qmake
# chown -R sgeadmin: $SGE_ROOT

설치

# cd $SGE_ROOT
# chmod -t /tmp
# ./install_qmaster

• Cluster Name 설징 외에는 전부 default 값으로 설정(Enter)

Unique cluster name
-------------------

The cluster name uniquely identifies a specific Sun Grid Engine cluster.
The cluster name must be unique throughout your organization. The name
is not related to the SGE cell.

The cluster name must start with a letter ([A-Za-z]), followed by letters,
digits ([0-9]), dashes (-) or underscores (_).

Enter new cluster name or hit <RETURN>
to use default [p6444] >> estar987

./install_execd
chmod +t /tmp
cd ~
source /opt/sge/default/common/settings.sh

# qconf -mconf

수정
...
min_uid 0
min_gid 0

# qconf -as $HOSTNAME
master-ubuntu-sge added to submit host list


# echo “sleep 20” | qsub

# qstat -f
queuename                      qtype resv/used/tot. load_avg arch          states
---------------------------------------------------------------------------------
all.q@master-ubuntu-sge        BIP   0/0/12         2.33     lx-amd64

SGE 를 기본 스케줄러로 사용하기(.bashrc 등록)

# vi .bashrc
source /opt/sge/default/common/settings.sh //추가
# source .bashrc

# vi /etc/exports
/opt/sge *(rw,no_root_squash) // 추가

systemctl restart nfs-server.service
systemctl restart sgemaster.service
systemctl restart sgemaster.service

# qconf -ah node01-ubuntu-sge
node01-ubuntu-sge added to administrative host list

증설 노드에서 작업

# apt install -y libhwloc-dev nfs-client qtchooser

# vim /etc/hosts
192.168.207.30 master-ubuntu-sge
192.168.207.31 node01-ubuntu-sge

# groupadd -g 490 sgeadmin
# useradd -u 495 -g 490 -r -m -d /home/sgeadmin -s /bin/bash -c "SGE Admin" sgeadmin

# systemctl restart nfs-utils.service
# mkdir -p /opt/sge
# export SGE_ROOT=/opt/sge
# export SGE_CELL=default
# mkdir $SGE_ROOT
# mount -t nfs master-ubuntu-sge:/opt/sge /opt/sge
# df (확인)

# vim /etc/fstab
master-ubuntu-sge:/opt/sge  /opt/sge nfs rw,soft,bg,vers=3 0 0  // 추가

# cd $SGE_ROOT 
# ./install_execd
모두 default

마스터에서 확인

# qstat -f
queuename                      qtype resv/used/tot. load_avg arch          states
---------------------------------------------------------------------------------
all.q@master-ubuntu-sge        BIP   0/0/12         1.17     lx-amd64
---------------------------------------------------------------------------------
all.q@node01-ubuntu-sge        BIP   0/0/12         3.12     lx-amd64